Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucuronyl hydrolase | DXD04_12195 | Not Available | Positive | 2940430 - 2941674 | 46897.6 |
| duf2264 domain-containing protein | DXD04_12200 | Not Available | Positive | 2941684 - 2942916 | 46968.4 |
| hypothetical protein | DXD04_12205 | Not Available | Positive | 2944174 - 2944683 | 19313.6 |
| mgtc/sapb family protein | DXD04_12210 | Not Available | Positive | 2944820 - 2945512 | 25226.9 |
| Trna-asp | Not Available | Not Available | Positive | 2945810 - 2945883 | Not Available |
| imidazole glycerol phosphate synthase subunit hish | DXD04_12220 | Not Available | Positive | 2946144 - 2946734 | 22125.8 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DXD04_12225 | Not Available | Positive | 2946756 - 2947478 | 26264.8 |
| imidazole glycerol phosphate synthase subunit hisf | DXD04_12230 | Not Available | Positive | 2947501 - 2948256 | 27305.5 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | DXD04_12235 | Not Available | Positive | 2948292 - 2948903 | 23525.2 |
| atp-binding cassette domain-containing protein | DXD04_12240 | Not Available | Positive | 2948913 - 2949593 | 25751.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

