Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine cyclotransferase | DXD04_01160 | Not Available | Negative | 262442 - 263440 | 37085.4 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | DXD04_01165 | Not Available | Negative | 263522 - 265291 | 66104.3 |
| hypothetical protein | DXD04_01170 | Not Available | Negative | 265475 - 267088 | 60966.4 |
| phosphate butyryltransferase | DXD04_01175 | Not Available | Positive | 267289 - 268209 | 33441.7 |
| butyrate kinase | DXD04_01180 | Not Available | Positive | 268221 - 269297 | 39077.0 |
| response regulator | DXD04_01185 | Not Available | Positive | 269838 - 273743 | 148691.0 |
| tonb-dependent receptor | DXD04_01190 | Not Available | Positive | 273859 - 276831 | 109011.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_01195 | Not Available | Positive | 276853 - 278424 | 58963.6 |
| duf5114 domain-containing protein | DXD04_01200 | Not Available | Positive | 278443 - 279891 | 51252.0 |
| arabinogalactan endo-1,4-beta-galactosidase | DXD04_01205 | Not Available | Positive | 279906 - 281003 | 41050.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

