Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase | DXD04_12090 | Not Available | Negative | 2895822 - 2896241 | 16392.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DXD04_12095 | Not Available | Negative | 2896253 - 2897485 | 45514.9 |
| hybrid sensor histidine kinase/response regulator | DXD04_12100 | Not Available | Negative | 2897527 - 2901489 | 150781.0 |
| glycoside hydrolase family 127 protein | DXD04_12105 | Not Available | Positive | 2902090 - 2904528 | 91225.7 |
| tonb-dependent receptor | DXD04_12110 | Not Available | Positive | 2904555 - 2907587 | 111865.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_12115 | Not Available | Positive | 2907600 - 2909267 | 63497.0 |
| duf4859 domain-containing protein | DXD04_12120 | Not Available | Positive | 2909293 - 2910300 | 36570.5 |
| hypothetical protein | DXD04_12130 | Not Available | Positive | 2912416 - 2913768 | 51854.4 |
| m24 family metallopeptidase | DXD04_12135 | Not Available | Positive | 2913781 - 2915154 | 51528.0 |
| dmt family transporter | DXD04_12140 | Not Available | Positive | 2915151 - 2916059 | 33151.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

