Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sugar transporter subunit iic | DXD04_11990 | Not Available | Negative | 2874484 - 2875875 | 50195.0 |
| hypothetical protein | DXD04_11995 | Not Available | Negative | 2876315 - 2876725 | 15182.0 |
| type i dna topoisomerase | DXD04_12000 | Not Available | Positive | 2876851 - 2879184 | 87913.6 |
| shikimate kinase | DXD04_12005 | Not Available | Positive | 2879181 - 2879705 | 19978.1 |
| biosynthetic arginine decarboxylase | DXD04_12010 | Not Available | Positive | 2879737 - 2881629 | 71505.0 |
| acetylglutamate kinase | DXD04_12015 | Not Available | Positive | 2881647 - 2882420 | 27540.3 |
| sigma-70 family rna polymerase sigma factor | DXD04_12020 | Not Available | Positive | 2882486 - 2882995 | 19949.8 |
| hypothetical protein | DXD04_12025 | Not Available | Positive | 2882985 - 2883464 | 18619.3 |
| duf340 domain-containing protein | DXD04_12030 | Not Available | Positive | 2883654 - 2883932 | 10186.2 |
| lysine exporter lyso family protein | DXD04_12035 | Not Available | Positive | 2883929 - 2884531 | 21554.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

