Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_11940 | Not Available | Negative | 2861376 - 2861786 | 15680.3 |
| sodium-dependent transporter | DXD04_11945 | Not Available | Positive | 2861877 - 2863250 | 49264.3 |
| helix-hairpin-helix domain-containing protein | DXD04_11950 | Not Available | Positive | 2863250 - 2864146 | 34938.5 |
| alkaline phosphatase | DXD04_11955 | Not Available | Negative | 2864148 - 2865566 | 52144.6 |
| fimbrillin family protein | DXD04_11960 | Not Available | Positive | 2865719 - 2866681 | 35713.4 |
| xanthine phosphoribosyltransferase | DXD04_11965 | Not Available | Positive | 2866847 - 2867416 | 21086.0 |
| purine permease | DXD04_11970 | Not Available | Positive | 2867425 - 2868759 | 46609.1 |
| beta-glucuronidase | DXD04_11975 | Not Available | Negative | 2868897 - 2871764 | 110724.0 |
| mfs transporter | DXD04_11980 | Not Available | Negative | 2871861 - 2873318 | 53700.7 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DXD04_11985 | Not Available | Negative | 2873539 - 2874459 | 34586.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

