Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DXD04_11890 | Not Available | Positive | 2843086 - 2846568 | 129607.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_11895 | Not Available | Positive | 2846589 - 2848508 | 72640.6 |
| arylsulfatase | DXD04_11900 | Not Available | Positive | 2848587 - 2850107 | 57746.2 |
| duf4976 domain-containing protein | DXD04_11905 | Not Available | Positive | 2850140 - 2851516 | 51393.6 |
| duf5110 domain-containing protein | DXD04_11910 | Not Available | Positive | 2851790 - 2855605 | 142372.0 |
| m20/m25/m40 family metallo-hydrolase | DXD04_11915 | Not Available | Negative | 2855717 - 2856781 | 38880.5 |
| long-chain fatty acid--coa ligase | DXD04_11920 | Not Available | Positive | 2856907 - 2858721 | 68985.8 |
| peptide chain release factor 2 | DXD04_11925 | Not Available | Positive | 2858817 - 2859932 | 42629.1 |
| cyth domain-containing protein | DXD04_11930 | Not Available | Positive | 2860175 - 2860681 | 19673.3 |
| rna polymerase sigma factor | DXD04_11935 | Not Available | Positive | 2860794 - 2861297 | 19841.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

