Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2795 domain-containing protein | DXD04_11740 | Not Available | Positive | 2809092 - 2809313 | 8716.91 |
| thioredoxin | DXD04_11745 | Not Available | Positive | 2809532 - 2810008 | 17214.0 |
| 4-alpha-glucanotransferase | DXD04_11750 | Not Available | Negative | 2810076 - 2812754 | 104553.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DXD04_11755 | Not Available | Negative | 2812912 - 2814876 | 72837.4 |
| 30s ribosomal protein s20 | DXD04_11760 | Not Available | Negative | 2815040 - 2815294 | 9651.98 |
| Trna-glu | Not Available | Not Available | Positive | 2815338 - 2815409 | Not Available |
| hypothetical protein | DXD04_11770 | Not Available | Positive | 2815787 - 2816302 | 18760.7 |
| dna repair protein reco | DXD04_11775 | Not Available | Positive | 2816304 - 2817029 | 28081.2 |
| gatb/yqey domain-containing protein | DXD04_11780 | Not Available | Negative | 2817120 - 2817569 | 16164.7 |
| cell division protein ftsz | DXD04_11785 | Not Available | Negative | 2817609 - 2818919 | 48005.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

