Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4979 domain-containing protein | DXD04_11575 | Not Available | Negative | 2767687 - 2769138 | 53630.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_11580 | Not Available | Negative | 2769181 - 2770899 | 65573.6 |
| tonb-dependent receptor | DXD04_11585 | Not Available | Negative | 2770913 - 2774125 | 118245.0 |
| rna polymerase subunit sigma-70 | DXD04_11590 | Not Available | Negative | 2774169 - 2774687 | 20460.7 |
| helix-turn-helix domain-containing protein | DXD04_11595 | Not Available | Negative | 2774910 - 2777813 | 109634.0 |
| six-hairpin glycosidase | DXD04_11600 | Not Available | Negative | 2778084 - 2780819 | 102586.0 |
| sss family transporter | DXD04_11605 | Not Available | Positive | 2781113 - 2782858 | 64734.4 |
| galactose mutarotase | DXD04_11610 | Not Available | Positive | 2783038 - 2784195 | 41991.4 |
| nudix domain-containing protein | DXD04_11615 | Not Available | Positive | 2784244 - 2784921 | 25990.2 |
| l-ribulose-5-phosphate 4-epimerase | DXD04_11620 | Not Available | Positive | 2784926 - 2785615 | 25123.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

