Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | DXD04_11525 | Not Available | Negative | 2753543 - 2754097 | 20955.6 |
| holliday junction resolvase ruvx | DXD04_11530 | Not Available | Negative | 2754119 - 2754535 | 15729.5 |
| glutamine-hydrolyzing gmp synthase | DXD04_11535 | Not Available | Positive | 2754722 - 2756275 | 57741.4 |
| mate family efflux transporter | DXD04_11540 | Not Available | Negative | 2756341 - 2757714 | 49975.2 |
| cytochrome c biogenesis protein cych | DXD04_11545 | Not Available | Negative | 2757828 - 2758805 | 37181.2 |
| flagellar motor protein motb | DXD04_11550 | Not Available | Positive | 2759334 - 2760176 | 31571.1 |
| hypothetical protein | DXD04_11555 | Not Available | Negative | 2760272 - 2761873 | 61416.8 |
| class a beta-lactamase-related serine hydrolase | DXD04_11560 | Not Available | Negative | 2761881 - 2762969 | 39479.1 |
| duf4981 domain-containing protein | DXD04_11565 | Not Available | Negative | 2763138 - 2766263 | 120109.0 |
| glycoside hydrolase family 92 | DXD04_11570 | Not Available | Negative | 2766343 - 2767557 | 46307.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

