Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DXD04_11475 | Not Available | Negative | 2740999 - 2742249 | 47627.4 |
| tolc family protein | DXD04_11480 | Not Available | Negative | 2742262 - 2743719 | 55859.4 |
| sigma-54-dependent fis family transcriptional regulator | DXD04_11485 | Not Available | Positive | 2743910 - 2745280 | 51550.6 |
| ghkl domain-containing protein | DXD04_11490 | Not Available | Positive | 2745268 - 2746551 | 48877.6 |
| lactonase family protein | DXD04_11495 | Not Available | Negative | 2746569 - 2747723 | 41092.0 |
| 50s ribosomal protein l20 | DXD04_11500 | Not Available | Negative | 2748115 - 2748465 | 13195.3 |
| 50s ribosomal protein l35 | DXD04_11505 | Not Available | Negative | 2748575 - 2748772 | 7371.38 |
| translation initiation factor if-3 | DXD04_11510 | Not Available | Negative | 2748845 - 2749426 | 22031.8 |
| threonine--trna ligase | DXD04_11515 | Not Available | Negative | 2749528 - 2751468 | 74247.1 |
| tetratricopeptide repeat protein | DXD04_11520 | Not Available | Negative | 2751543 - 2753546 | 77818.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

