Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DXD04_11425 | Not Available | Negative | 2723250 - 2724494 | 45039.9 |
| arac family transcriptional regulator | DXD04_11430 | Not Available | Positive | 2724591 - 2725625 | 40140.6 |
| abc transporter atp-binding protein | DXD04_11435 | Not Available | Negative | 2725497 - 2726171 | 24684.7 |
| abc transporter permease | DXD04_11440 | Not Available | Negative | 2726197 - 2728566 | 89318.7 |
| ahpc/tsa family protein | DXD04_11445 | Not Available | Negative | 2728592 - 2730139 | 58941.6 |
| abc transporter permease | DXD04_11450 | Not Available | Negative | 2730178 - 2732586 | 90541.9 |
| abc transporter permease | DXD04_11455 | Not Available | Negative | 2732607 - 2734955 | 88515.0 |
| abc transporter permease | DXD04_11460 | Not Available | Negative | 2734973 - 2737354 | 90472.1 |
| abc transporter permease | DXD04_11465 | Not Available | Negative | 2737393 - 2739771 | 91045.9 |
| sel1 repeat family protein | DXD04_11470 | Not Available | Negative | 2739827 - 2740780 | 35549.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

