Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DXD04_11325 | Not Available | Positive | 2704668 - 2705885 | 47669.1 |
| dna-binding protein | DXD04_11330 | Not Available | Negative | 2706032 - 2706313 | 11000.3 |
| dna-binding protein | DXD04_11335 | Not Available | Negative | 2706318 - 2706605 | 11410.8 |
| dna-binding protein | DXD04_11340 | Not Available | Positive | 2706943 - 2707251 | 11770.4 |
| virulence protein | DXD04_11345 | Not Available | Positive | 2707232 - 2708464 | 47620.8 |
| mobilization protein | DXD04_11350 | Not Available | Positive | 2708790 - 2709770 | 37394.1 |
| plasmid mobilization relaxosome protein mobc | DXD04_11355 | Not Available | Positive | 2709927 - 2710310 | 14205.2 |
| mobilization protein | DXD04_11360 | Not Available | Positive | 2710276 - 2711199 | 34624.6 |
| hypothetical protein | DXD04_11365 | Not Available | Positive | 2711204 - 2711929 | 27916.8 |
| dna-binding protein | DXD04_11370 | Not Available | Negative | 2711972 - 2712304 | 13149.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

