Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxykinase (atp) | DXD04_11275 | Not Available | Negative | 2693445 - 2695049 | 59053.2 |
| uracil phosphoribosyltransferase | DXD04_11280 | Not Available | Positive | 2695329 - 2695982 | 24380.1 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | DXD04_11285 | Not Available | Negative | 2696043 - 2697053 | 36682.7 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | DXD04_11290 | Not Available | Negative | 2697087 - 2698934 | 66554.2 |
| signal peptide peptidase sppa | DXD04_11295 | Not Available | Positive | 2699433 - 2701193 | 65095.1 |
| tetraacyldisaccharide 4'-kinase | DXD04_11300 | Not Available | Positive | 2701209 - 2702309 | 41645.9 |
| purine-nucleoside phosphorylase | DXD04_11305 | Not Available | Positive | 2702266 - 2703075 | 29697.1 |
| thiamine-phosphate kinase | DXD04_11310 | Not Available | Positive | 2703083 - 2704120 | 37929.5 |
| hypothetical protein | DXD04_11315 | Not Available | Negative | 2704140 - 2704334 | 7654.39 |
| Trna-phe | Not Available | Not Available | Positive | 2704344 - 2704416 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

