Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_11120 | Not Available | Negative | 2652588 - 2654123 | 57436.2 |
| duf4984 domain-containing protein | DXD04_11125 | Not Available | Negative | 2654149 - 2655045 | 33423.6 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_11130 | Not Available | Negative | 2655069 - 2656583 | 58073.1 |
| tonb-dependent receptor | DXD04_11135 | Not Available | Negative | 2656599 - 2659532 | 108770.0 |
| abc transporter permease | DXD04_11145 | Not Available | Negative | 2660803 - 2662032 | 45609.9 |
| 30s ribosome-binding factor rbfa | DXD04_11150 | Not Available | Negative | 2662133 - 2662468 | 12943.9 |
| methyltransferase | DXD04_11155 | Not Available | Negative | 2662478 - 2663116 | 24530.6 |
| pyruvate kinase | DXD04_11160 | Not Available | Negative | 2663119 - 2664579 | 54034.2 |
| type ii 3-dehydroquinate dehydratase | DXD04_11165 | Not Available | Negative | 2664590 - 2665021 | 16083.2 |
| site-specific tyrosine recombinase xerd | DXD04_11170 | Not Available | Positive | 2665087 - 2665998 | 34997.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

