Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | DXD04_10475 | Not Available | Negative | 2542164 - 2543087 | 34784.7 |
| hypothetical protein | DXD04_10480 | Not Available | Negative | 2543084 - 2543977 | 33827.9 |
| conjugal transfer protein trao | DXD04_10485 | Not Available | Negative | 2543986 - 2544543 | 20335.5 |
| conjugative transposon protein tran | DXD04_10490 | Not Available | Negative | 2544540 - 2545532 | 37708.8 |
| conjugative transposon protein tram | DXD04_10495 | Not Available | Negative | 2545602 - 2546924 | 48192.0 |
| duf3989 domain-containing protein | DXD04_10500 | Not Available | Negative | 2546899 - 2547192 | 10709.2 |
| conjugative transposon protein trak | DXD04_10505 | Not Available | Negative | 2547206 - 2547829 | 23869.5 |
| conjugative transposon protein traj | DXD04_10510 | Not Available | Negative | 2547879 - 2548904 | 37762.1 |
| duf4141 domain-containing protein | DXD04_10515 | Not Available | Negative | 2548908 - 2549546 | 23565.3 |
| duf3876 domain-containing protein | DXD04_10520 | Not Available | Negative | 2549585 - 2550007 | 15948.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

