Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pcfj-like protein | DXD04_10425 | Not Available | Positive | 2536427 - 2537707 | 49763.3 |
| hypothetical protein | DXD04_10430 | Not Available | Positive | 2537734 - 2537991 | 9975.16 |
| duf3873 domain-containing protein | DXD04_10435 | Not Available | Positive | 2538004 - 2538225 | 8794.43 |
| hypothetical protein | DXD04_10440 | Not Available | Positive | 2538222 - 2538461 | 9350.22 |
| hypothetical protein | DXD04_10445 | Not Available | Positive | 2538524 - 2538727 | 8094.52 |
| hypothetical protein | DXD04_10450 | Not Available | Positive | 2538781 - 2539086 | 11620.1 |
| duf262 domain-containing protein | DXD04_10455 | Not Available | Positive | 2539266 - 2540366 | 43035.6 |
| hypothetical protein | DXD04_10460 | Not Available | Positive | 2540353 - 2541036 | 26296.6 |
| lysozyme | DXD04_10465 | Not Available | Negative | 2541116 - 2541640 | 20627.4 |
| duf3872 domain-containing protein | DXD04_10470 | Not Available | Negative | 2541637 - 2542158 | 19638.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

