Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transporter | DXD04_10270 | Not Available | Positive | 2496337 - 2497998 | 59494.1 |
| fructose-1,6-bisphosphatase | DXD04_10275 | Not Available | Positive | 2498022 - 2500019 | 76737.7 |
| hypothetical protein | DXD04_10280 | Not Available | Negative | 2500172 - 2502250 | 76513.6 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_10285 | Not Available | Negative | 2502297 - 2504048 | 66506.1 |
| susc/raga family tonb-linked outer membrane protein | DXD04_10290 | Not Available | Negative | 2504067 - 2507087 | 112921.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_10295 | Not Available | Negative | 2507128 - 2509110 | 76244.2 |
| tonb-dependent receptor | DXD04_10300 | Not Available | Negative | 2509130 - 2512297 | 117521.0 |
| hypothetical protein | DXD04_10305 | Not Available | Negative | 2512320 - 2513918 | 58265.8 |
| fimbrillin family protein | DXD04_10310 | Not Available | Negative | 2513938 - 2514969 | 37727.4 |
| Trna-glu | Not Available | Not Available | Positive | 2515629 - 2515700 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

