Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-1-phosphate guanylyltransferase | DXD04_10220 | Not Available | Negative | 2483234 - 2484298 | 40392.5 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DXD04_10225 | Not Available | Positive | 2484381 - 2485214 | 29227.7 |
| [acyl-carrier-protein] s-malonyltransferase | DXD04_10230 | Not Available | Positive | 2485275 - 2486162 | 31316.8 |
| alpha-amylase | DXD04_10235 | Not Available | Positive | 2486276 - 2487976 | 65216.9 |
| long-chain fatty acid--coa ligase | DXD04_10240 | Not Available | Positive | 2488103 - 2489761 | 62817.2 |
| hypothetical protein | DXD04_10245 | Not Available | Positive | 2489766 - 2491013 | 43912.9 |
| crp/fnr family transcriptional regulator | DXD04_10250 | Not Available | Negative | 2491052 - 2491639 | 22672.9 |
| yitt family protein | DXD04_10255 | Not Available | Negative | 2491655 - 2492542 | 32615.6 |
| ll-diaminopimelate aminotransferase | DXD04_10260 | Not Available | Positive | 2492700 - 2493929 | 45990.2 |
| glutamine synthetase type iii | DXD04_10265 | Not Available | Positive | 2493986 - 2496175 | 82392.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

