Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pkd domain-containing protein | DXD04_10170 | Not Available | Positive | 2471946 - 2472887 | 35914.8 |
| hypothetical protein | DXD04_10175 | Not Available | Positive | 2472884 - 2475232 | 89812.3 |
| hypothetical protein | DXD04_10180 | Not Available | Positive | 2475238 - 2476041 | 30920.3 |
| type vi secretion system needle protein hcp | DXD04_10185 | Not Available | Positive | 2476555 - 2476950 | 14749.5 |
| type iv secretion protein rhs | DXD04_10190 | Not Available | Positive | 2477061 - 2478824 | 63174.2 |
| hypothetical protein | DXD04_10195 | Not Available | Positive | 2478864 - 2480207 | 51229.6 |
| hypothetical protein | DXD04_10200 | Not Available | Positive | 2480173 - 2480460 | 10984.6 |
| type iv secretion protein rhs | DXD04_10205 | Not Available | Positive | 2480479 - 2481365 | 29866.7 |
| duf368 domain-containing protein | DXD04_10210 | Not Available | Negative | 2481606 - 2482520 | 33475.0 |
| thiol peroxidase | DXD04_10215 | Not Available | Positive | 2482647 - 2483150 | 17823.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

