Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath protein tssc | DXD04_10120 | Not Available | Negative | 2461343 - 2462722 | 52717.4 |
| hypothetical protein | DXD04_10125 | Not Available | Negative | 2462735 - 2463202 | 17242.5 |
| lysozyme | DXD04_10130 | Not Available | Positive | 2463370 - 2463792 | 16326.8 |
| hypothetical protein | DXD04_10135 | Not Available | Positive | 2463800 - 2465575 | 67841.0 |
| atp-dependent clp protease atp-binding subunit | DXD04_10140 | Not Available | Positive | 2465572 - 2468010 | 90681.4 |
| hypothetical protein | DXD04_10145 | Not Available | Positive | 2467995 - 2468930 | 35890.5 |
| hypothetical protein | DXD04_10150 | Not Available | Positive | 2468944 - 2469822 | 33990.1 |
| hypothetical protein | DXD04_10155 | Not Available | Positive | 2469826 - 2470974 | 43337.6 |
| hypothetical protein | DXD04_10160 | Not Available | Positive | 2470995 - 2471492 | 19326.7 |
| hypothetical protein | DXD04_10165 | Not Available | Positive | 2471489 - 2471935 | 17559.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

