Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcium-translocating p-type atpase, pmca-type | DXD04_00960 | Not Available | Positive | 235851 - 238478 | 96544.0 |
| had family phosphatase | DXD04_00965 | Not Available | Positive | 238475 - 239095 | 24060.1 |
| riboflavin biosynthesis protein ribf | DXD04_00970 | Not Available | Positive | 239100 - 240032 | 34834.2 |
| atp-dependent rna helicase | DXD04_00975 | Not Available | Positive | 240092 - 241981 | 71329.0 |
| glycoside hydrolase | DXD04_00980 | Not Available | Negative | 242027 - 243010 | 37077.7 |
| duf3467 domain-containing protein | DXD04_00985 | Not Available | Positive | 243194 - 243517 | 12024.4 |
| 30s ribosomal protein s12 | DXD04_00990 | Not Available | Positive | 243704 - 244111 | 14779.1 |
| 30s ribosomal protein s7 | DXD04_00995 | Not Available | Positive | 244262 - 244738 | 18120.9 |
| elongation factor g | DXD04_01000 | Not Available | Positive | 244768 - 246885 | 77827.1 |
| 30s ribosomal protein s10 | DXD04_01005 | Not Available | Positive | 246980 - 247285 | 11419.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

