Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_10015 | Not Available | Positive | 2445016 - 2445351 | 13159.7 |
| trna (adenine-n(6)-)-methyltransferase | DXD04_10020 | Not Available | Positive | 2445401 - 2446000 | 23287.0 |
| conjugative transposon protein tran | DXD04_10025 | Not Available | Positive | 2446013 - 2446858 | 32070.7 |
| hypothetical protein | DXD04_10030 | Not Available | Positive | 2446855 - 2447367 | 19050.2 |
| duf1566 domain-containing protein | DXD04_10035 | Not Available | Positive | 2447389 - 2448045 | 23979.3 |
| hypothetical protein | DXD04_10040 | Not Available | Positive | 2448059 - 2448796 | 28174.2 |
| type iv secretory system conjugative dna transfer family protein | DXD04_10045 | Not Available | Positive | 2448800 - 2450986 | 83199.4 |
| hypothetical protein | DXD04_10050 | Not Available | Negative | 2451104 - 2451460 | 13268.0 |
| hypothetical protein | DXD04_10055 | Not Available | Positive | 2451437 - 2451808 | 14330.8 |
| hypothetical protein | DXD04_10060 | Not Available | Negative | 2451774 - 2452055 | 11044.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

