Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_09915 | Not Available | Positive | 2427058 - 2427831 | 29275.3 |
| dna-binding protein | DXD04_09920 | Not Available | Positive | 2428008 - 2428406 | 15553.8 |
| mobilization protein | DXD04_09925 | Not Available | Positive | 2428384 - 2429490 | 41879.3 |
| dna primase | DXD04_09930 | Not Available | Positive | 2429597 - 2430484 | 33989.9 |
| hypothetical protein | DXD04_09935 | Not Available | Positive | 2430720 - 2431172 | 16789.6 |
| duf4134 domain-containing protein | DXD04_09940 | Not Available | Positive | 2431108 - 2431497 | 14132.7 |
| duf4134 domain-containing protein | DXD04_09945 | Not Available | Positive | 2431558 - 2431935 | 13424.2 |
| duf4133 domain-containing protein | DXD04_09950 | Not Available | Positive | 2431947 - 2432240 | 10591.3 |
| duf87 domain-containing protein | DXD04_09955 | Not Available | Positive | 2432351 - 2435062 | 104171.0 |
| hypothetical protein | DXD04_09960 | Not Available | Positive | 2435062 - 2435700 | 25431.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

