Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_09865 | Not Available | Positive | 2414130 - 2414861 | 28634.9 |
| restriction endonuclease subunit s | DXD04_09870 | Not Available | Positive | 2414866 - 2416029 | 43630.9 |
| atp-binding protein | DXD04_09875 | Not Available | Positive | 2416255 - 2417577 | 50307.0 |
| rlob domain-containing protein | DXD04_09880 | Not Available | Positive | 2417584 - 2418237 | 25484.3 |
| type i restriction endonuclease subunit r | DXD04_09885 | Not Available | Positive | 2418242 - 2421370 | 119680.0 |
| hypothetical protein | DXD04_09890 | Not Available | Positive | 2421404 - 2421745 | 12596.0 |
| mate family efflux transporter | DXD04_09895 | Not Available | Negative | 2421987 - 2423474 | 53156.8 |
| pyridoxal phosphate-dependent aminotransferase | DXD04_09900 | Not Available | Negative | 2423479 - 2424657 | 44636.1 |
| duf3737 family protein | DXD04_09905 | Not Available | Negative | 2424670 - 2425536 | 33253.0 |
| site-specific integrase | DXD04_09910 | Not Available | Positive | 2425794 - 2426924 | 43216.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

