Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxylamine reductase | DXD04_09815 | Not Available | Negative | 2402904 - 2404556 | 60542.1 |
| crp/fnr family transcriptional regulator | DXD04_09820 | Not Available | Positive | 2404671 - 2405294 | 23540.7 |
| adenine nucleotide alpha hydrolase family protein | DXD04_09825 | Not Available | Negative | 2405298 - 2406056 | 29138.6 |
| tetratricopeptide repeat protein | DXD04_09830 | Not Available | Positive | 2406290 - 2407708 | 54093.9 |
| nodulation efficiency protein d (nfed) | DXD04_09835 | Not Available | Positive | 2407724 - 2408188 | 16625.5 |
| upf0365 family protein | DXD04_09840 | Not Available | Positive | 2408231 - 2409232 | 35932.7 |
| phosphorylase | DXD04_09845 | Not Available | Positive | 2409280 - 2410158 | 32286.8 |
| gaf domain-containing protein | DXD04_09850 | Not Available | Positive | 2410231 - 2410722 | 18136.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DXD04_09855 | Not Available | Positive | 2410795 - 2412225 | 51998.2 |
| sam-dependent dna methyltransferase | DXD04_09860 | Not Available | Positive | 2412614 - 2414119 | 56337.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

