Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated protein glde | DXD04_09765 | Not Available | Positive | 2389560 - 2390921 | 51545.1 |
| hypothetical protein | DXD04_09770 | Not Available | Positive | 2390924 - 2391583 | 25287.4 |
| asma family protein | DXD04_09775 | Not Available | Positive | 2391606 - 2394602 | 111482.0 |
| mfs transporter | DXD04_09780 | Not Available | Positive | 2394703 - 2396259 | 56949.8 |
| m23 family peptidase | DXD04_09785 | Not Available | Positive | 2396342 - 2397292 | 35437.2 |
| hypothetical protein | DXD04_09790 | Not Available | Negative | 2397338 - 2397919 | 21188.9 |
| hypothetical protein | DXD04_09795 | Not Available | Positive | 2398222 - 2398543 | 12591.5 |
| site-specific dna-methyltransferase | DXD04_09800 | Not Available | Positive | 2398540 - 2399733 | 46244.3 |
| hypothetical protein | DXD04_09805 | Not Available | Positive | 2400123 - 2401775 | 63466.1 |
| m20/m25/m40 family metallo-hydrolase | DXD04_09810 | Not Available | Positive | 2401913 - 2402899 | 36782.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

