Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyric acid synthase | DXD04_09665 | Not Available | Positive | 2362758 - 2364776 | 74788.5 |
| pyridoxal phosphate-dependent class ii aminotransferase | DXD04_09670 | Not Available | Positive | 2364769 - 2365782 | 37920.1 |
| cobalamin biosynthesis protein cobd | DXD04_09675 | Not Available | Positive | 2365764 - 2366705 | 34578.7 |
| hypothetical protein | DXD04_09680 | Not Available | Negative | 2366859 - 2369168 | 86280.3 |
| hypothetical protein | DXD04_09685 | Not Available | Negative | 2369210 - 2371426 | 82264.0 |
| hypothetical protein | DXD04_09690 | Not Available | Negative | 2371454 - 2373307 | 70265.5 |
| arac family transcriptional regulator | DXD04_09695 | Not Available | Negative | 2373605 - 2374513 | 35618.8 |
| efflux rnd transporter periplasmic adaptor subunit | DXD04_09700 | Not Available | Positive | 2374705 - 2375814 | 39870.0 |
| acrb/acrd/acrf family protein | DXD04_09705 | Not Available | Positive | 2375824 - 2379015 | 116324.0 |
| tolc family protein | DXD04_09710 | Not Available | Positive | 2379016 - 2380392 | 50521.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

