Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25/general stress protein ctc | DXD04_09615 | Not Available | Negative | 2355538 - 2356134 | 21682.8 |
| duf3276 family protein | DXD04_09620 | Not Available | Negative | 2356324 - 2356698 | 14485.2 |
| transcription antitermination factor nusb | DXD04_09625 | Not Available | Positive | 2356879 - 2357805 | 36177.3 |
| preprotein translocase subunit yajc | DXD04_09630 | Not Available | Positive | 2357846 - 2358154 | 11212.9 |
| ybbr-like domain-containing protein | DXD04_09635 | Not Available | Positive | 2358167 - 2359201 | 39361.0 |
| dephospho-coa kinase | DXD04_09640 | Not Available | Positive | 2359198 - 2359803 | 22486.8 |
| hypothetical protein | DXD04_09645 | Not Available | Positive | 2359869 - 2360282 | 15238.3 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | DXD04_09650 | Not Available | Positive | 2360434 - 2360943 | 19328.0 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DXD04_09655 | Not Available | Positive | 2360947 - 2361987 | 38019.3 |
| adenosylcobinamide-gdp ribazoletransferase | DXD04_09660 | Not Available | Positive | 2361992 - 2362738 | 27795.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

