Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | DXD04_00910 | Not Available | Positive | 221287 - 223284 | 76277.6 |
| duf4981 domain-containing protein | DXD04_00915 | Not Available | Positive | 223322 - 226879 | 134092.0 |
| duf4976 domain-containing protein | DXD04_00920 | Not Available | Positive | 226901 - 228469 | 61337.7 |
| trna 2-thiouridine(34) synthase mnma | DXD04_00925 | Not Available | Negative | 228546 - 229673 | 42595.5 |
| ferredoxin | DXD04_00930 | Not Available | Negative | 229690 - 230496 | 29076.7 |
| holliday junction branch migration dna helicase ruvb | DXD04_00935 | Not Available | Positive | 230616 - 231641 | 37933.5 |
| lipopolysaccharide biosynthesis protein | DXD04_00940 | Not Available | Positive | 231650 - 233140 | 56410.4 |
| tigr00341 family protein | DXD04_00945 | Not Available | Positive | 233194 - 234552 | 50652.9 |
| hypothetical protein | DXD04_00950 | Not Available | Negative | 234705 - 235463 | 28275.1 |
| Trna-met | Not Available | Not Available | Positive | 235612 - 235688 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

