Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | DXD04_09545 | Not Available | Negative | 2336277 - 2336852 | 22045.6 |
| mate family efflux transporter | DXD04_09550 | Not Available | Negative | 2336892 - 2338235 | 48889.6 |
| mate family efflux transporter | DXD04_09575 | Not Available | Positive | 2342055 - 2343425 | 49891.4 |
| sdr family nad(p)-dependent oxidoreductase | DXD04_09580 | Not Available | Negative | 2343415 - 2344158 | 27972.5 |
| hypothetical protein | DXD04_09585 | Not Available | Negative | 2344158 - 2348405 | 161905.0 |
| hypothetical protein | DXD04_09590 | Not Available | Negative | 2348430 - 2349260 | 30838.0 |
| copper-translocating p-type atpase | DXD04_09595 | Not Available | Negative | 2349492 - 2352029 | 92414.7 |
| sodium:proton antiporter | DXD04_09600 | Not Available | Positive | 2352168 - 2354444 | 83973.3 |
| rna-binding s4 domain-containing protein | DXD04_09605 | Not Available | Negative | 2354507 - 2354935 | 16464.7 |
| aminoacyl-trna hydrolase | DXD04_09610 | Not Available | Negative | 2354941 - 2355504 | 20808.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

