Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DXD04_09485 | Not Available | Positive | 2326162 - 2326515 | 13476.2 |
| virulence protein e | DXD04_09490 | Not Available | Positive | 2326512 - 2327111 | 23086.9 |
| duf3987 domain-containing protein | DXD04_09495 | Not Available | Positive | 2327062 - 2328867 | 68779.5 |
| plasmid mobilization relaxosome protein mobc | DXD04_09500 | Not Available | Positive | 2328969 - 2329337 | 13840.7 |
| mobilization protein | DXD04_09505 | Not Available | Positive | 2329321 - 2330220 | 34271.8 |
| hypothetical protein | DXD04_09510 | Not Available | Positive | 2330220 - 2330864 | 25036.3 |
| integrase | DXD04_09515 | Not Available | Negative | 2331069 - 2331875 | 31985.9 |
| xre family transcriptional regulator | DXD04_09525 | Not Available | Negative | 2332393 - 2332599 | 7551.27 |
| hypothetical protein | DXD04_09530 | Not Available | Negative | 2332715 - 2333317 | 23024.3 |
| duf3828 domain-containing protein | DXD04_09540 | Not Available | Positive | 2335431 - 2336264 | 31862.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

