Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DXD04_09425 | Not Available | Positive | 2312992 - 2314281 | 47953.7 |
| duf340 domain-containing protein | DXD04_09430 | Not Available | Positive | 2314805 - 2315083 | 9781.69 |
| lysine exporter lyso family protein | DXD04_09435 | Not Available | Positive | 2315080 - 2315712 | 22676.6 |
| gnat family n-acetyltransferase | DXD04_09440 | Not Available | Negative | 2315764 - 2316261 | 19615.7 |
| padr family transcriptional regulator | DXD04_09445 | Not Available | Positive | 2316429 - 2316758 | 12602.2 |
| pspc domain-containing protein | DXD04_09450 | Not Available | Positive | 2316771 - 2317850 | 39720.1 |
| molecular chaperone dnak | DXD04_09455 | Not Available | Positive | 2318041 - 2319957 | 68132.8 |
| haloacid dehalogenase | DXD04_09460 | Not Available | Positive | 2320031 - 2321137 | 42918.7 |
| helicase | DXD04_09465 | Not Available | Negative | 2321261 - 2324194 | 111210.0 |
| rna polymerase subunit sigma-70 | DXD04_09475 | Not Available | Negative | 2324883 - 2325542 | 24441.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

