Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 2302291 - 2302366 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2302372 - 2302458 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2302487 - 2302570 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2302602 - 2302677 | Not Available |
| duf1573 domain-containing protein | DXD04_09395 | Not Available | Negative | 2303239 - 2303643 | 14613.7 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DXD04_09400 | Not Available | Negative | 2303746 - 2305956 | 84952.7 |
| duf4301 family protein | DXD04_09405 | Not Available | Positive | 2306091 - 2307614 | 56870.9 |
| arac family transcriptional regulator | DXD04_09410 | Not Available | Negative | 2307701 - 2308615 | 35049.1 |
| efflux rnd transporter periplasmic adaptor subunit | DXD04_09415 | Not Available | Positive | 2308771 - 2309850 | 39159.5 |
| acrb/acrd/acrf family protein | DXD04_09420 | Not Available | Positive | 2309866 - 2312955 | 114877.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

