Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DXD04_09270 | Not Available | Positive | 2282884 - 2284152 | 47454.8 |
| lysr family transcriptional regulator | DXD04_09275 | Not Available | Negative | 2284175 - 2285071 | 33903.0 |
| hypothetical protein | DXD04_09280 | Not Available | Negative | 2285085 - 2285666 | 21561.9 |
| helix-turn-helix domain-containing protein | DXD04_09285 | Not Available | Negative | 2285969 - 2287075 | 42871.9 |
| energy-dependent translational throttle protein etta | DXD04_09290 | Not Available | Negative | 2287210 - 2288898 | 63979.5 |
| mfs transporter | DXD04_09295 | Not Available | Negative | 2288918 - 2290039 | 41732.8 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DXD04_09300 | Not Available | Negative | 2290147 - 2290968 | 29546.1 |
| had family hydrolase | DXD04_09305 | Not Available | Negative | 2291032 - 2291679 | 24462.2 |
| mate family efflux transporter | DXD04_09310 | Not Available | Positive | 2291767 - 2293128 | 49478.4 |
| divalent metal cation transporter | DXD04_09315 | Not Available | Negative | 2293125 - 2294387 | 46107.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

