Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | DXD04_09120 | Not Available | Positive | 2243059 - 2243538 | 17701.0 |
| acyltransferase | DXD04_09125 | Not Available | Negative | 2243545 - 2244702 | 44282.0 |
| abc-f family atpase | DXD04_09130 | Not Available | Negative | 2244889 - 2246508 | 61077.9 |
| dna-binding response regulator | DXD04_09135 | Not Available | Negative | 2246627 - 2247385 | 28686.7 |
| histidine kinase | DXD04_09140 | Not Available | Negative | 2247382 - 2248425 | 40430.6 |
| efflux rnd transporter periplasmic adaptor subunit | DXD04_09145 | Not Available | Negative | 2248435 - 2249352 | 33421.9 |
| cusa/czca family heavy metal efflux rnd transporter | DXD04_09150 | Not Available | Negative | 2249373 - 2253707 | 161231.0 |
| nucleotide exchange factor grpe | DXD04_09155 | Not Available | Positive | 2253985 - 2254590 | 22830.8 |
| molecular chaperone dnaj | DXD04_09160 | Not Available | Positive | 2254606 - 2255790 | 42520.6 |
| hypothetical protein | DXD04_09165 | Not Available | Positive | 2256108 - 2256764 | 24241.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

