Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXD04_00855 | Not Available | Negative | 205415 - 205630 | 8116.46 |
| molybdenum abc transporter atp-binding protein | DXD04_00860 | Not Available | Negative | 205638 - 205973 | 12959.5 |
| hypothetical protein | DXD04_00870 | Not Available | Negative | 206690 - 206869 | 6531.03 |
| lipopolysaccharide biosynthesis protein | DXD04_00875 | Not Available | Negative | 207008 - 208453 | 53724.8 |
| methionine--trna ligase | DXD04_00880 | Not Available | Negative | 208552 - 210594 | 77732.8 |
| tonb-dependent receptor | DXD04_00885 | Not Available | Positive | 210921 - 214175 | 119369.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXD04_00890 | Not Available | Positive | 214187 - 215734 | 58814.1 |
| glycerophosphodiester phosphodiesterase | DXD04_00895 | Not Available | Positive | 215755 - 216648 | 33945.1 |
| ydcf family protein | DXD04_00900 | Not Available | Positive | 216561 - 217871 | 50013.4 |
| glycoside hydrolase family 92 protein | DXD04_00905 | Not Available | Positive | 217906 - 220674 | 103584.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

