Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dethiobiotin synthetase biod | DXD04_08970 | Not Available | Negative | 2217338 - 2217988 | 24896.9 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | DXD04_08975 | Not Available | Negative | 2218002 - 2218751 | 28403.1 |
| duf452 family protein | DXD04_08980 | Not Available | Negative | 2218736 - 2219404 | 25500.3 |
| 8-amino-7-oxononanoate synthase | DXD04_08985 | Not Available | Negative | 2219425 - 2220600 | 43628.8 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DXD04_08990 | Not Available | Negative | 2220619 - 2221908 | 47898.1 |
| biotin synthase biob | DXD04_08995 | Not Available | Negative | 2221898 - 2222860 | 35407.6 |
| hypothetical protein | DXD04_09000 | Not Available | Negative | 2222910 - 2223299 | 14199.1 |
| tlpa family protein disulfide reductase | DXD04_09005 | Not Available | Negative | 2223389 - 2224597 | 46144.2 |
| tlpa family protein disulfide reductase | DXD04_09010 | Not Available | Negative | 2224610 - 2225800 | 45751.7 |
| m56 family peptidase | DXD04_09015 | Not Available | Negative | 2225916 - 2227184 | 48181.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

