Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate dehydrogenase subunit vorb | DXD04_08920 | Not Available | Positive | 2205480 - 2206562 | 39320.7 |
| 2-oxoglutarate oxidoreductase | DXD04_08925 | Not Available | Positive | 2206758 - 2207531 | 28297.4 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit gamma | DXD04_08930 | Not Available | Positive | 2207547 - 2208089 | 19958.7 |
| hypothetical protein | DXD04_08935 | Not Available | Positive | 2208261 - 2210348 | 79988.0 |
| glutamine abc transporter substrate-binding protein | DXD04_08940 | Not Available | Positive | 2210359 - 2211177 | 31261.5 |
| gfo/idh/moca family oxidoreductase | DXD04_08945 | Not Available | Positive | 2211190 - 2212179 | 36855.2 |
| duf4421 domain-containing protein | DXD04_08950 | Not Available | Positive | 2212341 - 2213360 | 39466.6 |
| hypothetical protein | DXD04_08955 | Not Available | Negative | 2213425 - 2215050 | 60845.0 |
| hypothetical protein | DXD04_08960 | Not Available | Negative | 2215086 - 2216324 | 46690.4 |
| dmt family transporter | DXD04_08965 | Not Available | Negative | 2216457 - 2217305 | 31007.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

