Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| v-type atp synthase subunit k | DXD04_08870 | Not Available | Negative | 2194392 - 2194853 | 15440.2 |
| v-type atp synthase subunit i | DXD04_08875 | Not Available | Negative | 2194889 - 2196697 | 66557.8 |
| v-type atp synthase subunit d | DXD04_08880 | Not Available | Negative | 2196694 - 2197299 | 23636.8 |
| v-type atp synthase subunit b | DXD04_08885 | Not Available | Negative | 2197317 - 2198636 | 48058.5 |
| v-type atp synthase subunit a | DXD04_08890 | Not Available | Negative | 2198661 - 2200418 | 65705.2 |
| duf2764 domain-containing protein | DXD04_08895 | Not Available | Negative | 2200434 - 2201273 | 32933.4 |
| hypothetical protein | DXD04_08900 | Not Available | Negative | 2201283 - 2201873 | 22102.3 |
| bifunctional dihydroorotate dehydrogenase b nad binding subunit/nadph-dependent glutamate synthase | DXD04_08905 | Not Available | Negative | 2202284 - 2204578 | 82502.3 |
| tetratricopeptide repeat protein | DXD04_08910 | Not Available | Positive | 2204929 - 2205207 | 10534.3 |
| 4fe-4s dicluster domain-containing protein | DXD04_08915 | Not Available | Positive | 2205220 - 2205450 | 8214.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

