Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DXD04_08815 | Not Available | Negative | 2172320 - 2173834 | 58436.6 |
| tonb-dependent receptor | DXD04_08820 | Not Available | Negative | 2173925 - 2176990 | 113222.0 |
| beta-galactosidase | DXD04_08825 | Not Available | Negative | 2177052 - 2179070 | 76844.3 |
| duf5107 domain-containing protein | DXD04_08830 | Not Available | Negative | 2179226 - 2182591 | 129033.0 |
| glycoside hydrolase family 2 | DXD04_08840 | Not Available | Negative | 2184120 - 2186906 | 104391.0 |
| hypothetical protein | DXD04_08845 | Not Available | Negative | 2187294 - 2187728 | 16494.8 |
| sensor histidine kinase | DXD04_08850 | Not Available | Negative | 2187836 - 2189104 | 49050.4 |
| dna-binding response regulator | DXD04_08855 | Not Available | Negative | 2189101 - 2189778 | 25810.1 |
| alpha-glucan family phosphorylase | DXD04_08860 | Not Available | Negative | 2189873 - 2192440 | 98782.7 |
| glycosyltransferase | DXD04_08865 | Not Available | Negative | 2192461 - 2194137 | 64168.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

