Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yggs family pyridoxal phosphate-dependent enzyme | DXD04_08660 | Not Available | Positive | 2129827 - 2130495 | 25208.2 |
| dihydroorotate dehydrogenase-like protein | DXD04_08665 | Not Available | Positive | 2130509 - 2131486 | 35760.6 |
| hpaii family restriction endonuclease | DXD04_08670 | Not Available | Negative | 2131571 - 2132656 | 41205.6 |
| tonb-dependent receptor | DXD04_08675 | Not Available | Positive | 2133346 - 2135676 | 87768.7 |
| transglutaminase domain-containing protein | DXD04_08680 | Not Available | Positive | 2136379 - 2137020 | 24636.8 |
| tonb-dependent receptor | DXD04_08685 | Not Available | Positive | 2137445 - 2139769 | 87324.5 |
| hypothetical protein | DXD04_08690 | Not Available | Positive | 2140936 - 2141697 | 29375.8 |
| hypothetical protein | DXD04_08695 | Not Available | Positive | 2141868 - 2142344 | 18814.6 |
| yjbq family protein | DXD04_08700 | Not Available | Positive | 2142438 - 2142851 | 15330.3 |
| penicillin-binding protein | DXD04_08705 | Not Available | Negative | 2142853 - 2144778 | 73706.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

