Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | DXD04_08560 | Not Available | Positive | 2104128 - 2104874 | 28807.3 |
| hypothetical protein | DXD04_08565 | Not Available | Negative | 2104938 - 2106218 | 47879.2 |
| cytochrome c assembly protein | DXD04_08570 | Not Available | Negative | 2106235 - 2107023 | 30411.7 |
| hypothetical protein | DXD04_08575 | Not Available | Negative | 2107034 - 2108260 | 45629.0 |
| ammonia-forming cytochrome c nitrite reductase | DXD04_08580 | Not Available | Negative | 2108266 - 2109741 | 55870.3 |
| cytochrome c nitrite reductase small subunit | DXD04_08585 | Not Available | Negative | 2109759 - 2110319 | 20787.2 |
| quinone-dependent dihydroorotate dehydrogenase | DXD04_08590 | Not Available | Negative | 2110540 - 2111589 | 39171.7 |
| hypothetical protein | DXD04_08595 | Not Available | Negative | 2111795 - 2115229 | 130314.0 |
| exonuclease sbccd subunit d | DXD04_08600 | Not Available | Negative | 2115233 - 2116447 | 46281.8 |
| s9 family peptidase | DXD04_08605 | Not Available | Negative | 2116453 - 2118897 | 91580.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

