Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DXD04_08510 | Not Available | Positive | 2097323 - 2098021 | 26812.5 |
| marr family transcriptional regulator | DXD04_08515 | Not Available | Negative | 2098465 - 2098911 | 17483.3 |
| 30s ribosomal protein s6 | DXD04_08520 | Not Available | Positive | 2099117 - 2099464 | 13588.4 |
| 30s ribosomal protein s18 | DXD04_08525 | Not Available | Positive | 2099467 - 2099736 | 10561.2 |
| 50s ribosomal protein l9 | DXD04_08530 | Not Available | Positive | 2099755 - 2100204 | 16203.9 |
| giy-yig nuclease family protein | DXD04_08535 | Not Available | Negative | 2100585 - 2100797 | 7932.59 |
| hd domain-containing protein | DXD04_08540 | Not Available | Negative | 2100934 - 2101413 | 17966.6 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DXD04_08545 | Not Available | Negative | 2101497 - 2102315 | 29937.1 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DXD04_08550 | Not Available | Negative | 2102290 - 2103441 | 42376.4 |
| pyridoxamine 5'-phosphate oxidase family protein | DXD04_08555 | Not Available | Negative | 2103475 - 2103990 | 19320.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

