Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s41 | DXD04_08410 | Not Available | Negative | 2071825 - 2073195 | 51176.6 |
| hypothetical protein | DXD04_08415 | Not Available | Negative | 2073253 - 2074122 | 33144.9 |
| hypothetical protein | DXD04_08420 | Not Available | Negative | 2074192 - 2075919 | 64141.9 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DXD04_08425 | Not Available | Positive | 2076013 - 2076771 | 29555.1 |
| mrp family atp-binding protein | DXD04_08430 | Not Available | Positive | 2076790 - 2077887 | 39398.8 |
| dna polymerase iv | DXD04_08435 | Not Available | Negative | 2078306 - 2079412 | 41825.6 |
| threonylcarbamoyl-amp synthase | DXD04_08440 | Not Available | Positive | 2079537 - 2080103 | 20736.1 |
| cbs domain-containing protein | DXD04_08445 | Not Available | Positive | 2080116 - 2081915 | 66483.2 |
| methionyl-trna formyltransferase | DXD04_08450 | Not Available | Positive | 2081931 - 2082902 | 36140.9 |
| hypothetical protein | DXD04_08455 | Not Available | Negative | 2082919 - 2083635 | 26546.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

