Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility lipoprotein gldb | DXD04_08360 | Not Available | Positive | 2059400 - 2060392 | 38639.6 |
| sam-dependent methyltransferase | DXD04_08365 | Not Available | Positive | 2060411 - 2061115 | 26182.0 |
| hypothetical protein | DXD04_08370 | Not Available | Negative | 2061120 - 2062103 | 37594.9 |
| lipoyl synthase | DXD04_08375 | Not Available | Negative | 2062156 - 2063007 | 31782.3 |
| s9 family peptidase | DXD04_08380 | Not Available | Negative | 2063084 - 2065282 | 83275.0 |
| energy transducer tonb | DXD04_08385 | Not Available | Negative | 2065307 - 2066620 | 48714.4 |
| abc transporter permease | DXD04_08390 | Not Available | Negative | 2066749 - 2068005 | 47302.5 |
| abc transporter permease | DXD04_08395 | Not Available | Negative | 2068018 - 2069193 | 44063.6 |
| biotin/lipoyl-binding protein | DXD04_08400 | Not Available | Negative | 2069200 - 2070183 | 35846.1 |
| alkaline protease | DXD04_08405 | Not Available | Negative | 2070193 - 2071686 | 54547.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

