Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | DXD04_08310 | Not Available | Negative | 2047644 - 2048438 | 30609.6 |
| rrna cytosine-c5-methyltransferase | DXD04_08315 | Not Available | Positive | 2048513 - 2049925 | 52441.7 |
| tolc family protein | DXD04_08320 | Not Available | Negative | 2050116 - 2051450 | 50148.4 |
| efflux rnd transporter periplasmic adaptor subunit | DXD04_08325 | Not Available | Negative | 2051454 - 2052551 | 40043.1 |
| abc transporter permease | DXD04_08330 | Not Available | Negative | 2052588 - 2053832 | 46030.3 |
| abc transporter permease | DXD04_08335 | Not Available | Negative | 2053835 - 2055085 | 46155.3 |
| abc transporter atp-binding protein | DXD04_08340 | Not Available | Negative | 2055096 - 2055815 | 26806.4 |
| rok family protein | DXD04_08345 | Not Available | Positive | 2055964 - 2056938 | 34436.5 |
| duf4861 domain-containing protein | DXD04_08350 | Not Available | Negative | 2056995 - 2058218 | 46070.4 |
| enoyl-acp reductase | DXD04_08355 | Not Available | Positive | 2058536 - 2059393 | 31309.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

