Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-layer protein | DXD04_08260 | Not Available | Negative | 2032315 - 2033973 | 63013.6 |
| carbon starvation protein a | DXD04_08265 | Not Available | Positive | 2034152 - 2035582 | 52450.6 |
| hypothetical protein | DXD04_08270 | Not Available | Positive | 2035650 - 2036891 | 45923.6 |
| glycoside hydrolase family 28 protein | DXD04_08275 | Not Available | Negative | 2036960 - 2038345 | 52456.6 |
| rhamnogalacturonan acetylesterase | DXD04_08280 | Not Available | Positive | 2038577 - 2039854 | 48314.1 |
| rhamnogalacturonan acetylesterase | DXD04_08285 | Not Available | Positive | 2040082 - 2041713 | 61147.5 |
| l-rhamnose mutarotase | DXD04_08290 | Not Available | Positive | 2041725 - 2042039 | 12356.7 |
| hybrid sensor histidine kinase/response regulator | DXD04_08295 | Not Available | Positive | 2042138 - 2046448 | 163092.0 |
| asnc family transcriptional regulator | DXD04_08300 | Not Available | Positive | 2046640 - 2047119 | 18141.0 |
| dihydrofolate reductase | DXD04_08305 | Not Available | Negative | 2047131 - 2047625 | 18873.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

