Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | DXD04_08210 | Not Available | Positive | 2022134 - 2023150 | 37909.9 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DXD04_08215 | Not Available | Negative | 2023137 - 2024048 | 35514.0 |
| hypothetical protein | DXD04_08220 | Not Available | Negative | 2024160 - 2024717 | 21570.5 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DXD04_08225 | Not Available | Negative | 2024764 - 2025531 | 27736.6 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | DXD04_08230 | Not Available | Negative | 2025533 - 2026918 | 51537.7 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DXD04_08235 | Not Available | Negative | 2026923 - 2027963 | 37244.9 |
| orotidine-5'-phosphate decarboxylase | DXD04_08240 | Not Available | Negative | 2028235 - 2029059 | 30979.2 |
| peptide chain release factor 1 | DXD04_08245 | Not Available | Negative | 2029131 - 2030240 | 41639.2 |
| hypothetical protein | DXD04_08250 | Not Available | Negative | 2030485 - 2030988 | 19417.1 |
| phosphoribosylformylglycinamidine cyclo-ligase | DXD04_08255 | Not Available | Negative | 2031063 - 2032232 | 42829.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

