Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium and cobalt transport protein cora | DXD04_08160 | Not Available | Negative | 2012809 - 2013849 | 40414.8 |
| 4fe-4s dicluster domain-containing protein | DXD04_08165 | Not Available | Negative | 2013862 - 2014719 | 32012.0 |
| hypothetical protein | DXD04_08170 | Not Available | Negative | 2014751 - 2015371 | 23902.8 |
| hypothetical protein | DXD04_08175 | Not Available | Positive | 2016137 - 2017468 | 50868.6 |
| vut family protein | DXD04_08180 | Not Available | Positive | 2017598 - 2018284 | 25124.7 |
| 7-cyano-7-deazaguanine synthase quec | DXD04_08185 | Not Available | Positive | 2018290 - 2018955 | 24872.8 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DXD04_08190 | Not Available | Positive | 2018958 - 2019416 | 17906.5 |
| dna polymerase iii subunit gamma/tau | DXD04_08195 | Not Available | Negative | 2019507 - 2021345 | 68635.9 |
| septum formation initiator family protein | DXD04_08200 | Not Available | Positive | 2021466 - 2021768 | 12038.6 |
| hypothetical protein | DXD04_08205 | Not Available | Positive | 2021768 - 2022109 | 12874.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

