Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | strain TF10-3AC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC TF10-3AC.Scaf71, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DXD04_08110 | Not Available | Negative | 2000471 - 2001592 | 41929.0 |
| abc transporter atp-binding protein | DXD04_08115 | Not Available | Negative | 2001589 - 2003079 | 56276.8 |
| hlyd family efflux transporter periplasmic adaptor subunit | DXD04_08120 | Not Available | Negative | 2003094 - 2003984 | 32978.5 |
| tolc family protein | DXD04_08125 | Not Available | Negative | 2004013 - 2005269 | 48099.7 |
| arac family transcriptional regulator | DXD04_08130 | Not Available | Positive | 2005427 - 2006335 | 35331.8 |
| mate family efflux transporter | DXD04_08135 | Not Available | Negative | 2006351 - 2007691 | 48613.8 |
| alanine--trna ligase | DXD04_08140 | Not Available | Negative | 2007836 - 2010454 | 97099.1 |
| m23 family peptidase | DXD04_08145 | Not Available | Positive | 2010588 - 2011553 | 36401.8 |
| merr family transcriptional regulator | DXD04_08150 | Not Available | Positive | 2011569 - 2011916 | 13701.8 |
| endonuclease iii | DXD04_08155 | Not Available | Negative | 2012127 - 2012774 | 24214.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

